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Nachiket P.Marathe, ChandanPal, Swapnil S.Gaikwad, ViktorJonsson, ErikKristiansson, and D.G. JoakimLarsson. Untreated urban waste contaminates Indian river sediments with resistance genes to last resort antibiotics. Water Research. https://doi.org/10.1016/j.watres.2017.07.060

Bengtsson-Palme J., Larsson DGJ., Kristiansson E. 2017. Using metagenomics to investigate human and environmental resistomes. J Antimicrob Chemother. DOI: https://doi.org/10.1093/jac/dkx199


Mark Davis, Andrea Whittaker, Mia Lindgren, Monika Djerf-Pierre, Lenore Manderson & Paul Flowers. Understanding media publics and the antimicrobial resistance crisis. Global Public Health. P ages 1-11 | Received 29 Nov 2016, Accepted 22 May 2017, Published online: 08 Jun 2017. http://dx.doi.org/10.1080/17441692.2017.1336248

Boulund F, Karlsson R, Gonzales-Siles L, Johnning A, Karami N, Al-Bayati O, Åhrén C, Moore ERB, Kristiansson E. Typing and Characterization of Bacteria Using Bottom-up Tandem Mass Spectrometry Proteomics. Mol Cell Proteomics. 2017 Jun;16(6):1052-1063. doi: 10.1074/mcp.M116.061721. Epub 2017 Apr 18.


Bengtsson-Palme J, Larsson DGJ, Kristiansson E. 2017. Using metagenomics to investigate human and environmental resistomes. Journal of Antimicrobial Chemotherapy. In press.


Ljungström LR, Jacobsson G, Claesson BEB, Andersson R, Enroth H. Respiratory viral infections are underdiagnosed in patients with suspected sepsis. Eur J Clin Microbiol Infect Dis. 2017 May 17. doi: 10.1007/s10096-017-2990-z.


J. Bengtsson-Palme. Antibiotic resistance in the food supply chain: Where can sequencing and metagenomics aid risk assessment? Curr Opin Food Sci. Volume 14, April 2017, Pages 66–71. http://dx.doi.org/10.1016/j.cofs.2017.01.010.


Flach CF, Pal C, Svensson CJ, Kristiansson E, Östman M, Bengtsson-Palme J, Tysklind M, Larsson DGJ. (2017). Does antifouling paint select for antibiotic resistance? Science of the Total Environment. Volumes 590–591, 15 July 2017, Pages 461–468. doi: 10.1016/j.scitotenv.2017.01.213.


Hao X*, Li X*, Pal C*, Hobman J, Rosen BP, Larsson DGJ, Saquib Q, Alwathnani HA, Zhu Y-G, Rensing C. (2017). Bacterial resistance to arsenic protects against protist killing. Biometals. Biometals. Volume 30, Issue 2, pp 307–311. doi: 10.1007/s10534-017-0003-4 (*-co-first authors).


Pal C, Asiani K, Arya S, Rensing C, Stekel DJ, Larsson DGJ, Hobman JL. (2017). Metal resistance and its association with antibiotic resistance. Advances in Microbial Physiology. Volume 70, Chapter 7, Pages 261-313. ISBN: 9780128123867.


Rönnerstrand, B. och V. Lapurente. Corruption and use of antibiotics in regions of Europe. Health Policy. 2017 Mar;121(3):250-256. doi: 10.1016/j.healthpol.2016.12.010. Epub 2017, Jan 7.




Ballard MS, Schønheyder HC, Knudsen JD, Lyytikäinen O, Dryden M, Kennedy KJ, Valiquette L, Pinholt M, Jacobsson G, Laupland KB; International Bacteremia Surveillance Collaborative. The changing epidemiology of group B streptococcus bloodstream infection: a multi-national population-based assessment. Infect Dis (Lond). 2016;48(5):386-91. doi: 10.3109/23744235.2015.1131330.

Bengtsson-Palme J and Larsson DGJ. (2016) Time to limit antibiotic pollution. The medicine maker, April issue, pp 17-18. (opinion paper).

Bengtsson-Palme J, Larsson DGJ (2016). Why limit antibiotic pollution? The role of environmental selection in antibiotic resistance development. APUA Newsletter, 34(2), 6-9.

Bengtsson-Palme J, Hammarén R, Pal C, Östman M, Björlenius B, Flach C-F, Fick J, Kristiansson E, Tysklind M, Larsson DGJ. (2016). Elucidating selection processes for antibiotic resistance in sewage treatment plants using metagenomics. Science of the Total Environment. doi: 10.1016/j.scitotenv.2016.06.228.

De Roda Husman A-M, Larsson DGJ (2016). Risk assessment and risk management of antimicrobial resistance in the environment. AMR control 2016. Pages 104-107. Global Health Dynamics, UK.

Edman-Wallér J, Ljungström L, Jacobsson G, Andersson R, Werner M. Systemic symptoms predict presence or development of severe sepsis and septic shock. Infect Dis (Lond). 2016;48(3):209-14. doi: 10.3109/23744235.2015.1104719.

Gao C, Uzelac I, Gottfries J, Eriksson LA. Exploration of multiple Sortase A protein conformations in virtual screening. Sci Rep. 2016 Feb 5;6:20413. doi: 10.1038/srep20413.

Johnning A, Jakobsson H, Boulund F, Salvà Serra F, Moore ERB, Åhrén C, Karami N, Kristiansson E. Draft genome sequence of extended-spectrum β-lactamase-producing Escherichia coli, strain CCUG 62462, isolated from a urine sample" Genome Announc. 2016 Dec 15;4(6). pii: e01382-16. doi: 10.1128/genomeA.01382-16.

Jonsson V, Österlund T, Nerman O, Kristiansson E. Statistical evaluation of methods for identification of differentially abundant genes in comparative metagenomics. BMC Genomics. 2016 Jan 25;17:78. doi: 10.1186/s12864-016-2386-y.

Jonsson V, Österlund T, Nerman O, Kristiansson E. Variability in Metagenomic Count Data and Its Influence on the Identification of Differentially Abundant Genes. J Comput Biol. 2016 Nov 28.

Karami N, Wold AE, Adlerberth I. Antibiotic resistance is linked to carriage of papC and iutA virulence genes and phylogenetic group D background in commensal and uropathogenic Escherichia coli from infants and young children. Eur J Clin Microbiol Infect Dis. 2016 Dec 6.

Kwiecinski J, Peetermans M, Liesenborghs L, Na M, Björnsdottir H, Zhu X, Jacobsson G, Johansson BR, Geoghegan JA, Foster TJ, Josefsson E, Bylund J, Verhamme P, Jin T. Staphylokinase Control of Staphylococcus aureus Biofilm Formation and Detachment Through Host Plasminogen Activation. J Infect Dis. 2016 Jan 1;213(1):139-48. doi: 10.1093/infdis/jiv360.

Larsson DGJ, Svennerholm A-M (2016). The role of antibacterial agents in the development of antibiotic resistance (in Swedish). Läkartidningen 2016;113:D44E.

Marathe NP, Shetty SA, Shouche YS, Larsson DGJ. 2016. Limited bacterial diversity within a treatment plant receiving antibiotic-containing waste from bulk drug production. PloS One 11(11): e0165914. doi:10.1371/journal.pone.0165914.

Munthe C. Antibiotikaresistens och etik. Ord & Bild, (5)64-68, 2016.

Müller V, Karami N, Nyberg LK, Pichler C, Torche Pedreschi PC, Quaderi S, Fritzsche J, Ambjörnsson T, Åhrén C, Westerlund F. Rapid Tracing of Resistance Plasmids in a Nosocomial Outbreak Using Optical DNA Mapping. ACS Infect Dis. 2016 May 13;2(5):322-8. doi: 10.1021/acsinfecdis.6b00017.

Müller V, Rajer F, Frykholm K, Nyberg LK, Quaderi S, Fritzsche J, Kristiansson E, Ambjörnsson T, Sandegren L, Westerlund F. Direct identification of antibiotic resistance genes on single plasmid molecules using CRISPR/Cas9 in combination with optical DNA mapping. Sci Rep. 2016 Dec 1;6:37938. doi: 10.1038/srep37938.

Nyberg LK, Quaderi S, Emilsson G, Karami N, Lagerstedt E, Müller V, Noble C, Hammarberg S, Nilsson AN, Sjöberg F, Fritzsche J, Kristiansson E, Sandegren L, Ambjörnsson T, Westerlund F. Rapid identification of intact bacterial resistance plasmids via optical mapping of single DNA molecules. Sci Rep. 2016 Jul 27;6:30410. doi: 10.1038/srep30410.

Pal C, Bengtsson-Palme J, Kristiansson E, Larsson DGJ. (2016). The structure and diversity of human, animal and environmental resistomes. Microbiome. 4:54. doi: 10.1186/s40168-016-0199-5.

Pereira MB, Kristiansson E, Axelsson-Fisk M, HattCI: fast and accurate attC site identification using hidden Markov models. J Comput Biol, 2016 Nov;23(11):891-902. Epub 2016 Jul 18


Runesson J, Shamansurova E, Jacobsson G. Antibiotics are being misused to treat diarrhoeal disease in children in Central Asia. Acta Paediatr. 2016 Dec;105(12):1382-1383. doi: 10.1111/apa.13583. PMID: 27870206.

Rönnerstrand B. Antibiotikaresistens och det kollektiva handlandets problem. Ord & Bild, (5)56-63, 2016.

Rönnerstrand B, Jagers S, Larsson DGJ (2016). Who worries about antibiotic resistance? (In Swedish). Ekvilibrium (Eds. Henrik Oscarsson, Jonas Ohlsson and Maria Solevid). SOM-institutet, University of Gothenburg. ISBN 978-91-89673-35-9.

Salvà-Serra F, Jakobsson HE, Thorell K, Gonzales-Siles L, Hallbäck ET, Jaén-Luchoro D, Boulund F, Sikora P, Karlsson R, Svensson L, Bennasar A, Engstrand L, Kristiansson E, Moore ER. Draft Genome Sequence of Streptococcus gordonii Type Strain CCUG 33482T. Genome Announc. 2016 Mar 24;4(2). pii: e00175-16. doi: 10.1128/genomeA.00175-16.

Skyman E, Lindahl B, Bergbom I, Sjöström HT, Åhrén C. Being Met as marked - patients' experiences of being infected with community-acquired methicillin-resistant Staphylococcus aureus (MRSA). Scand J Caring Sci. 2016 Dec;30(4):813-820. doi: 10.1111/scs.12309.

Svensson J. och C. Verdinelli. Mirakellösningen som blev ett problem. Ord & Bild, (5)36-41, 2016.

Wehrli PM, Angerer TB, Farewell A, Fletcher JS, Gottfries J. Investigating the Role of the Stringent Response in Lipid Modifications during the Stationary Phase in E. coli by Direct Analysis with Time-of-Flight-Secondary Ion Mass Spectrometry. Anal Chem. 2016 Sep 6;88(17):8680-8. doi: 10.1021/acs.analchem.6b01981.

Zaborowska M, Tillander J, Branemark R, Hagberg L, Thomsen P, Trobos M. Biofilm formation and antimicrobial susceptibility of staphylococci and enterococci from osteomyelitis associated with percutaneous orthopaedic implants. J Biomed Mater Res B Appl Biomater. Oct 25 2016.


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